nf-core/odgi/stats @ 0.0.0-6c4ed3a
Summary
Metrics describing a variation graph and its path relationship.
Get started
Add the following snippet to your workflow script to include this module.
include { ODGI_STATS } from 'nf-core/odgi/stats'
License
MIT License
Process
Name
|
ODGI_STATS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
graph
file
|
Pangenome graph in binary ODGI or in GFA v1.0 format *.{og,gfa}
|
Output
3 channels
#1
tsv
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.og.stats.tsv
file
|
Optional output file that contains graph statistics in TSV format. *.{tsv}
|
#2
yaml
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.og.stats.yaml
file
|
Optional output file that contains graph statistics in YAML format. *.{yaml}
|
#3
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| odgi | An optimized dynamic genome/graph implementation | https://github.com/pangenome/odgi |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:33:29 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fodgi%2Fstats/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/odgi/stats/blobs/sha256:4b2259f552a6c6cd2c5d16426ccbe9b142fb1cc08d2c9ce711c673e2983ffbad |
| Size | 2.2 KB |
| Checksum | sha256:4b2259f552a6c6cd2c5d16426ccbe9b142fb1cc08d2c9ce711c673e2983ffbad |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:33:29 (UTC) | 4 | 2.2 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:23:56 (UTC) | 4 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:21:57 (UTC) | 3 | 2.2 KB |