nf-core/odgi/view @ 0.0.0-6c4ed3a
Summary
Project a graph into other formats.
Get started
Add the following snippet to your workflow script to include this module.
include { ODGI_VIEW } from 'nf-core/odgi/view'
License
MIT License
Process
Name
|
ODGI_VIEW |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
graph
file
|
Pangenome graph in GFA v1.0 format or in ODGI binary format *.{gfa,og}
|
Output
2 channels
#1
gfa
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.gfa
file
|
File containing a pangenome graph in GFA v1.0 format. *.{gfa}
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| odgi | An optimized dynamic genome/graph implementation | https://github.com/pangenome/odgi |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:33:32 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fodgi%2Fview/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/odgi/view/blobs/sha256:9edd33e39c761b979929112b7f830f7c5819e496e7da55cb8219f923f7b4b1ba |
| Size | 2.1 KB |
| Checksum | sha256:9edd33e39c761b979929112b7f830f7c5819e496e7da55cb8219f923f7b4b1ba |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:33:32 (UTC) | 3 | 2.1 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:23:58 (UTC) | 3 | 2.1 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:22:01 (UTC) | 3 | 2.1 KB |