nf-core/odgi/viz @ 0.0.0-6c4ed3a
Summary
Visualize a variation graph in 1D.
Get started
Add the following snippet to your workflow script to include this module.
include { ODGI_VIZ } from 'nf-core/odgi/viz'
License
MIT License
Process
Name
|
ODGI_VIZ |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
graph
file
|
Pangenome graph in binary ODGI or in GFA v1.0 format *.{og,gfa}
|
Output
2 channels
#1
png
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.png
file
|
A 1D visualization of a pangenome graph. *.{png}
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| odgi | An optimized dynamic genome/graph implementation | https://github.com/pangenome/odgi |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:33:35 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fodgi%2Fviz/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/odgi/viz/blobs/sha256:d2235506d662f932c555a359cc090d51c80176925794c22be8da51344e244f27 |
| Size | 2.1 KB |
| Checksum | sha256:d2235506d662f932c555a359cc090d51c80176925794c22be8da51344e244f27 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:33:35 (UTC) | 3 | 2.1 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:23:59 (UTC) | 3 | 2.1 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:22:03 (UTC) | 3 | 2.1 KB |