nf-core/traitar/pfamget @ 0.0.0-6c4ed3a
Summary
Download PFAM database for traitar phenotype prediction
Get started
Add the following snippet to your workflow script to include this module.
include { TRAITAR_PFAMGET } from 'nf-core/traitar/pfamget'
License
MIT License
Process
Name
|
TRAITAR_PFAMGET |
|---|
Output
2 channels
#1
pfam_db
pfam_data
directory
|
PFAM database directory containing HMM profiles pfam_data
|
|---|
#2
versions_traitar
tuple
${task.process}
string
|
The name of the process |
|---|---|
traitar
string
|
The name of the tool |
traitar --version 2>&1 | tail -1
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| traitar | Microbial trait prediction from genome sequences | https://github.com/hzi-bifo/traitar3 |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:50:00 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Ftraitar%2Fpfamget/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/traitar/pfamget/blobs/sha256:653499770da511383c54526470b8cb3daae0cf27f5706a19c551070a81d00961 |
| Size | 1.9 KB |
| Checksum | sha256:653499770da511383c54526470b8cb3daae0cf27f5706a19c551070a81d00961 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:50:00 (UTC) | 1 | 1.9 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:34:36 (UTC) | 1 | 1.9 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:43:57 (UTC) | 1 | 1.9 KB |