Nextflow Modules
Showing module(s) with keyword "antibiotic resistance"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/abritamr/run | Process | bacteria fasta antibiotic resistance | A NATA accredited tool for reporting the presence of antimicrobial resistance genes in bacterial genomes |
| nf-core/amrfinderplus/run | Process | bacteria fasta antibiotic resistance | Identify antimicrobial resistance in gene or protein sequences |
| nf-core/amrfinderplus/update | Process | bacteria fasta antibiotic resistance | Identify antimicrobial resistance in gene or protein sequences |
| nf-core/rgi/bwt | Process | bacteria fasta antibiotic resistance | Predict antibiotic resistance from protein or nucleotide data |
| nf-core/rgi/cardannotation | Process | bacteria fasta antibiotic resistance | Preprocess the CARD database for RGI to predict antibiotic resistance from protein or nucleotide data |
| nf-core/rgi/main | Process | bacteria fasta antibiotic resistance | Predict antibiotic resistance from protein or nucleotide data |