Nextflow Modules
Showing module(s) with keyword "de novo assembler"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/abyss/abysspe | Process | genome assembly genome assembler short reads de novo assembler | ABySS is a de novo sequence assembler intended for short paired-end reads and genomes of all sizes. |
| nf-core/spades | Process | genome assembly genome assembler small genome de novo assembler | Assembles a small genome (bacterial, fungal, viral) |
| nf-core/trinity | Process | assembly de novo assembler fasta fastq | Assembles a de novo transcriptome from RNAseq reads |