Nextflow Modules
Showing module(s) with keyword "genome-wide association study"
| Module | Keywords | Description |
|---|---|---|
| nf-core/gcta/fastgwa | gcta genome-wide complex trait analysis fastgwa fast genome-wide association gwas genome-wide association study genetics | Run GCTA fastGWA mixed linear model association analysis with PLINK genotype inputs |
| nf-core/regenie/runl0 | regenie gwas genome-wide association study association genomics parallel | Run one REGENIE step 1 level-0 job from a split master file |
| nf-core/regenie/runl1 | regenie gwas genome-wide association study association genomics parallel | Finish REGENIE step 1 from split level-0 prediction files |
| nf-core/regenie/splitl0 | regenie gwas genome-wide association study association genomics parallel | Split REGENIE step 1 level-0 ridge-regression blocks into parallel jobs |
| nf-core/regenie/step2 | regenie gwas genome-wide association study association burden test genomics | Run REGENIE step 2 association testing from precomputed step 1 predictions |