Nextflow Modules
Showing module(s) with keyword "metabolic model"
| Module | Keywords | Description |
|---|---|---|
| nf-core/carveme/carve | metabolic model genome-scale sbml flux balance analysis metabolic reconstruction | Reconstruct genome-scale metabolic models from protein FASTA files using CarveMe |
| nf-core/gapseq/doall | metabolic model gap filling pathway prediction bacteria genome-scale model complete workflow | Complete gapseq workflow from genome to gap-filled model |
| nf-core/gapseq/draft | metabolic model draft reconstruction bacteria genome-scale model | Create draft metabolic model from pathway and transporter predictions |
| nf-core/gapseq/fill | metabolic model gap filling bacteria genome-scale model | Perform gap filling on draft metabolic model |