Nextflow Modules
Showing module(s) with keyword "short reads"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/abyss/abysspe | Process | genome assembly genome assembler short reads de novo assembler | ABySS is a de novo sequence assembler intended for short paired-end reads and genomes of all sizes. |
| nf-core/fastq_removeadapters_merge | Workflow | adapters removal short reads merge trim | Remove adapters and merge reads based on various module choices |
| nf-core/filtlong | Process | nanopore quality control QC filtering long reads short reads | Filtlong filters long reads based on quality measures or short read data. |
| nf-core/metacache/build | Process | genomics metagenomics taxonomy short reads long reads kmer k-mer metacache build reference | Taxonomic profiling database building with MetaCache |
| nf-core/ngsbits/samplegender | Process | gender cram bam short reads | Determines the gender of a sample from the BAM/CRAM file. |