nf-python / 0.1.3 / Download Trends
Total downloads:
138
Description:
The `nf-python` plugin integrates Nextflow workflows with Python scripts, enabling seamless execution of Python code within pipelines while automatically handling argument passing and output serialization. It solves the challenge of combining Python-based data processing with Nextflow's workflow management, ideal for bioinformaticians, data scientists, or developers who need to incorporate Python tools or custom scripts into scalable, reproducible pipelines. Users can specify Python environments (e.g., Conda) and run scripts either as external files or inline code, simplifying hybrid workflow development.