nf-core/amrfinderplus/update @ 0.0.0-6c4ed3a
Summary
Identify antimicrobial resistance in gene or protein sequences
Get started
Add the following snippet to your workflow script to include this module.
include { AMRFINDERPLUS_UPDATE } from 'nf-core/amrfinderplus/update'
License
MIT License
Process
Name
|
AMRFINDERPLUS_UPDATE |
|---|
Output
2 channels
#1
db
amrfinderdb.tar.gz
file
|
The latest AMRFinder+ database in a compressed tarball *.tar.gz
|
|---|
#2
versions_amrfinder
tuple
${task.process}
string
|
The name of the process |
|---|---|
amrfinder
string
|
The name of the tool |
amrfinder --version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| amrfinderplus | AMRFinderPlus finds antimicrobial resistance and other genes in protein or nucleotide sequences. | https://github.com/ncbi/amr/wiki |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:02:09 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Famrfinderplus%2Fupdate/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/amrfinderplus/update/blobs/sha256:89b1e5cafc2011f1559f1deba8884907aad8916d9d02cfb6f302cc7b805702c6 |
| Size | 2.0 KB |
| Checksum | sha256:89b1e5cafc2011f1559f1deba8884907aad8916d9d02cfb6f302cc7b805702c6 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:02:09 (UTC) | 3 | 2.0 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:01:41 (UTC) | 3 | 2.0 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:42:19 (UTC) | 2 | 2.0 KB |