nf-core/cooler/balance @ 0.0.0-6c4ed3a
Summary
Run matrix balancing on a cool file
Get started
Add the following snippet to your workflow script to include this module.
include { COOLER_BALANCE } from 'nf-core/cooler/balance'
License
MIT License
Process
Name
|
COOLER_BALANCE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
cool
file
|
Path to COOL file *.{cool,mcool}
|
resolution
integer
|
Resolution |
Output
2 channels
#1
cool
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
${prefix}.${extension}
file
|
Output COOL file balancing weights *.cool
|
#2
versions_cooler
tuple
${task.process}
string
|
The name of the process |
|---|---|
cooler
string
|
The name of the tool |
cooler --version 2>&1 | sed "s/cooler, version //"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| cooler | Sparse binary format for genomic interaction matrices | https://open2c.github.io/cooler/ |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:11:19 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fcooler%2Fbalance/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/cooler/balance/blobs/sha256:d2a97288e31dd04f1a387598b0b67e2173733f78692bccac3f3e19b2ae4562b3 |
| Size | 2.4 KB |
| Checksum | sha256:d2a97288e31dd04f1a387598b0b67e2173733f78692bccac3f3e19b2ae4562b3 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:11:19 (UTC) | 3 | 2.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:07:49 (UTC) | 3 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:54:01 (UTC) | 2 | 2.4 KB |