Nextflow Modules
Showing module(s) with keyword "cool"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/cooler/balance | Process | cooler/balance cooler cool | Run matrix balancing on a cool file |
| nf-core/cooler/cload | Process | cool cooler cload hic | Create a cooler from genomic pairs and bins |
| nf-core/cooler/zoomify | Process | mcool cool cooler | Generate a multi-resolution cooler file by coarsening |
| nf-core/cooltools/eigscis | Process | cool Hi-C compartment signal eigenvector | Perform eigen value decomposition on a cooler matrix to calculate compartment signal by finding the eigenvector that correlates best with the phasing track |
| nf-core/cooltools/insulation | Process | cool insulation Hi-C | Calculate the diamond insulation scores and call insulating boundaries |