nf-core/fastqutils/info @ 0.0.0-6c4ed3a
Summary
Performs quality control of FASTQ files
Get started
Add the following snippet to your workflow script to include this module.
include { FASTQUTILS_INFO } from 'nf-core/fastqutils/info'
License
MIT License
Process
Name
|
FASTQUTILS_INFO |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
reads
file
|
List of input FastQ files of size 1 and 2 for single-end and paired-end data, respectively. *.{fastq,fastq.gz}
|
Output
2 channels
#1
info
tuple
meta
map
|
Groovy Map containing sample information |
|---|---|
*.txt
file
|
Contains info if process ran successfully |
#2
versions_fastqutils
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
fastqutils
string
|
The tool name |
fastq_info -h 2>&1 | head -n 1 | sed 's/^fastq_utils //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| fastqutils | Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification. | https://github.com/nunofonseca/fastq_utils |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:16:58 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Ffastqutils%2Finfo/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/fastqutils/info/blobs/sha256:782ccf8bd1ba9adb354db3491f580d8d6da2c84292a6f2acaaafe1a2a91f90ac |
| Size | 2.6 KB |
| Checksum | sha256:782ccf8bd1ba9adb354db3491f580d8d6da2c84292a6f2acaaafe1a2a91f90ac |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:16:58 (UTC) | 4 | 2.6 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:12:01 (UTC) | 3 | 2.6 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:59:45 (UTC) | 2 | 2.6 KB |