nf-core/genmod/annotate @ 0.0.0-6c4ed3a
Summary
for annotating regions, frequencies, cadd scores
Get started
Add the following snippet to your workflow script to include this module.
include { GENMOD_ANNOTATE } from 'nf-core/genmod/annotate'
License
MIT License
Process
Name
|
GENMOD_ANNOTATE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
input_vcf
file
|
VCF file *.{vcf}
|
Output
2 channels
#1
vcf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*_annotate.vcf
file
|
Annotated VCF file *.{vcf}
|
#2
versions_genmod
tuple
${task.process}
string
|
Name of the process |
|---|---|
genmod
string
|
Name of the tool |
genmod --version | sed 's/^.*genmod version: //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| genmod | Annotate genetic inheritance models in variant files | https://github.com/Clinical-Genomics/genmod |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:21:03 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fgenmod%2Fannotate/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/genmod/annotate/blobs/sha256:5546b3a417efe17f9b13a7041edce1bb9504e356bfaf48a21ddec4de17b20400 |
| Size | 2.4 KB |
| Checksum | sha256:5546b3a417efe17f9b13a7041edce1bb9504e356bfaf48a21ddec4de17b20400 |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:21:03 (UTC) | 2 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:05:35 (UTC) | 3 | 2.4 KB |