nf-core/genmod/models @ 0.0.0-6c4ed3a
Summary
annotate models of inheritance
Get started
Add the following snippet to your workflow script to include this module.
include { GENMOD_MODELS } from 'nf-core/genmod/models'
License
MIT License
Process
Name
|
GENMOD_MODELS |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
input_vcf
file
|
vcf file *.{vcf}
|
fam
file
|
PED file with family information |
reduced_penetrance
file
|
file with gene ids that have reduced penetrance *.{tsv}
|
|---|
Output
2 channels
#1
vcf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*_models.vcf
file
|
Output VCF file *.{vcf}
|
#2
versions_genmod
tuple
${task.process}
string
|
Name of the process |
|---|---|
genmod
string
|
Name of the tool |
genmod --version | sed 's/^.*genmod version: //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| genmod | Annotate genetic inheritance models in variant files | https://github.com/Clinical-Genomics/genmod |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:21:06 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fgenmod%2Fmodels/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/genmod/models/blobs/sha256:bc4ac069f0ef9bcdbe2514481171ddf51a5e47e2bfea0c8208eb118ed4d8ba25 |
| Size | 2.5 KB |
| Checksum | sha256:bc4ac069f0ef9bcdbe2514481171ddf51a5e47e2bfea0c8208eb118ed4d8ba25 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:21:06 (UTC) | 3 | 2.5 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:05:39 (UTC) | 2 | 2.5 KB |