nf-core/grabix/check @ 0.0.0-6c4ed3a
Summary
Checks if the input file is bgzip compressed or not
Get started
Add the following snippet to your workflow script to include this module.
include { GRABIX_CHECK } from 'nf-core/grabix/check'
License
MIT License
Process
Name
|
GRABIX_CHECK |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
input
file
|
file to check compression *.gz
|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
compress_bgzip
meta
string
|
environmental variable with value "yes" or "no" |
|---|
| Tool | Description | Homepage |
|---|---|---|
| grabix | a wee tool for random access into BGZF files. | https://github.com/arq5x/grabix |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:21:54 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fgrabix%2Fcheck/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/grabix/check/blobs/sha256:94ffa417457427a5da76cc2ecdf3d6ea28671bbb554915f56010114c9f305d29 |
| Size | 1.9 KB |
| Checksum | sha256:94ffa417457427a5da76cc2ecdf3d6ea28671bbb554915f56010114c9f305d29 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:21:54 (UTC) | 3 | 1.9 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:14:21 (UTC) | 3 | 1.9 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:06:47 (UTC) | 3 | 1.9 KB |