Nextflow Modules
Showing module(s) with keyword "bgzip"
| Module | Keywords | Description |
|---|---|---|
| nf-core/grabix/check | compression bgzip grabix | Checks if the input file is bgzip compressed or not |
| nf-core/htslib/bgziptabix | compress decompress index bgzip tabix gzip bzip xz | Multi-purpose module to compress, decompress and index files using bgzip and tabix. |
| nf-core/samtools/bgzip | compression fasta gff vcf bed BGZF gzip bgzip | DEPRECATED. Use HTSLIB/BGZIPTABIX instead. Converts an arbitrary compressed or uncompressed file to BGZIP |
| nf-core/sgdemux | demultiplex fastq bgzip | Demultiplex bgzip'd fastq files |
| nf-core/tabix/bgzip | compress decompress bgzip tabix | DEPRECATED. Use HTSLIB/BGZIPTABIX instead. Compresses/decompresses files |
| nf-core/tabix/bgziptabix | bgzip compress index tabix vcf | DEPRECATED. Use HTSLIB/BGZIPTABIX instead. bgzip a sorted tab-delimited genome file and then create tabix index |