nf-core/hostile/fetch @ 0.0.0-6c4ed3a
Summary
Downloads required reference genomes for Hostile
Get started
Add the following snippet to your workflow script to include this module.
include { HOSTILE_FETCH } from 'nf-core/hostile/fetch'
License
MIT License
Process
Name
|
HOSTILE_FETCH |
|---|
Input
1 channel
index_name
string
|
Name of the reference genome index to download |
|---|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
reference
tuple
index_name
directory
|
Name of the reference genome index downloaded |
|---|---|
reference/
directory
|
Directory containing required reference genome files for hostile clean reference/
|
| Tool | Description | Homepage |
|---|---|---|
| hostile | Hostile: accurate host decontamination | https://github.com/bede/hostile |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:24:38 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fhostile%2Ffetch/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/hostile/fetch/blobs/sha256:10b9cf566cd9d3f255a50e308a4e41fd3c41beb945f4863c27f1837df2eb7f82 |
| Size | 2.4 KB |
| Checksum | sha256:10b9cf566cd9d3f255a50e308a4e41fd3c41beb945f4863c27f1837df2eb7f82 |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:24:38 (UTC) | 4 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:10:05 (UTC) | 3 | 2.4 KB |