Nextflow Modules
Showing module(s) with keyword "hostile"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/fastq_decontaminate_deacon_hostile | Workflow | hostile deacon filter index fasta fastq genome reference minimizer decontamination | Decontaminate FastQ files by filtering reads that match a reference genome using Deacon or Hostile |
| nf-core/fastq_fetch_clean_hostile | Workflow | hostile decontamination human removal download host removal clean | Downloads required reference genomes for hostile and removes host reads from short-read FASTQ sequencing files |
| nf-core/hostile/clean | Process | hostile decontamination human removal host removal clean | Removes host reads from short- and long-read FASTQ sequencing files |
| nf-core/hostile/fetch | Process | hostile decontamination human removal download | Downloads required reference genomes for Hostile |