nf-core/knotannotsv @ 0.0.0-6c4ed3a
Summary
Simple tool to create a customizable html file (to be displayed on a web browser) from an AnnotSV output
Get started
Add the following snippet to your workflow script to include this module.
include { KNOTANNOTSV } from 'nf-core/knotannotsv'
License
MIT License
Process
Name
|
KNOTANNOTSV |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
annotsv_tsv
file
|
Annotated TSV produced by AnnotSV *.tsv
|
knot_out_xl
boolean
|
Specify 'true' to output as XLSM (rather than HTML by default) |
Output
3 channels
#1
xl
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.xlsm
file
|
Alternative XLSM annotated file (if 'knot_out_xl=true') *.xlsm
|
#2
html
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.html
file
|
HTML annotated file *.html
|
#3
versions_knotannotsv
tuple
${task.process}
string
|
The name of the process |
|---|---|
knotannotsv
string
|
The name of the tool |
1.1.5
string
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| knotannotsv | Simple tool to create a customizable html file (to be displayed on a web browser) from an AnnotSV output | https://github.com/mobidic/knotAnnotSV |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:27:07 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fknotannotsv/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/knotannotsv/blobs/sha256:fca220d7619c93cc6f6a7960d72270a28745f93d15762a124ceb5db04e489292 |
| Size | 2.8 KB |
| Checksum | sha256:fca220d7619c93cc6f6a7960d72270a28745f93d15762a124ceb5db04e489292 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:27:07 (UTC) | 3 | 2.8 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:18:57 (UTC) | 3 | 2.8 KB | |
| 0.0.0-f7a55a7 | 09 Apr 2026 15:00:40 (UTC) | 4 | 2.8 KB |