nf-core/merquryfk/ploidyplot @ 0.0.0-6c4ed3a
Summary
An improved version of Smudgeplot using FastK
Get started
Add the following snippet to your workflow script to include this module.
include { MERQURYFK_PLOIDYPLOT } from 'nf-core/merquryfk/ploidyplot'
License
MIT License
Process
Name
|
MERQURYFK_PLOIDYPLOT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastk_hist
file
|
A histogram files from the program FastK *.hist
|
fastk_ktab
file
|
ktab files from the program FastK *.ktab*
|
Output
4 channels
#1
images
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.{png,pdf}
file
|
A stacked ploidy plot in PNG or PDFformat *.{png,pdf}
|
#2
versions_r
tuple
${task.process}
string
|
The name of the process |
|---|---|
R
string
|
The name of the tool |
R --version | sed "1!d; s/.*version //; s/ .*//"
eval
|
The expression to obtain the version of the tool |
#3
versions_fastk
tuple
${task.process}
string
|
The name of the process |
|---|---|
fastk
string
|
The name of the tool |
echo 1.1
eval
|
The expression to obtain the version of the tool |
#4
versions_merquryfk
tuple
${task.process}
string
|
The name of the process |
|---|---|
merquryfk
string
|
The name of the tool |
echo 1.1.1
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| merquryfk | FastK based version of Merqury | https://github.com/thegenemyers/MERQURY.FK |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:30:01 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fmerquryfk%2Fploidyplot/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/merquryfk/ploidyplot/blobs/sha256:bb0cd104145568fa2e5827a1b8380c1e56a88d31b5933e7c2a808b6d9349ef75 |
| Size | 2.9 KB |
| Checksum | sha256:bb0cd104145568fa2e5827a1b8380c1e56a88d31b5933e7c2a808b6d9349ef75 |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:30:01 (UTC) | 4 | 2.9 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:17:05 (UTC) | 3 | 2.8 KB |