nf-core/metabuli/build @ 0.0.0-0c7146d
Summary
Builds a database for classification with metabuli from FASTA files and a taxonomy
Get started
Add the following snippet to your workflow script to include this module.
include { METABULI_BUILD } from 'nf-core/metabuli/build'
License
MIT License
Name
|
METABULI_BUILD |
|---|
meta
map
|
Groovy Map containing sample information |
|---|---|
fasta
file
|
List of fasta files with input assemblies |
taxonomy_names
file
|
File describing individual members of a taxonomic tree in NCBI nodes.dmp format |
|---|
taxonomy_nodes
file
|
File describing parent-child relationships of a taxonomic tree in NCBI nodes.dmp format |
|---|
taxonomy_merged
file
|
Optional input to map old/deprecated TaxID to new ones |
|---|
accession2taxid
directory
|
TSV file (with no header) of first column with mapping accession (from first part of each fasta entry) and second column the corresponding TaxID |
|---|
cds_info
file
|
List of files to cds files |
|---|
db
tuple
meta
map
|
Groovy Map containing sample information |
|---|---|
$prefix
directory
|
metabuli database directory for classification |
versions_metabuli
tuple
${task.process}
string
|
The name of the process |
|---|---|
metabuli
string
|
The name of the tool |
metabuli 2>&1 | awk '/metabuli Version:/ {print $3}'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| metabuli | Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid | https://github.com/steineggerlab/Metabuli |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:17:16 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fmetabuli%2Fbuild/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/metabuli/build/blobs/sha256:7fdac01e3beac9aa8cd48bbfbd54f1ec039d4a0aa645c6268b4352342b4d8832 |
| Size | 3.2 KB |
| Checksum | sha256:7fdac01e3beac9aa8cd48bbfbd54f1ec039d4a0aa645c6268b4352342b4d8832 |
| Downloads | 1 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:30:09 (UTC) | 1 | 3.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:21:30 (UTC) | 1 | 3.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:17:16 (UTC) | 1 | 3.2 KB |