nf-core/nanolyse @ 0.0.0-0c7146d
Summary
DNA contaminant removal using NanoLyse
Get started
Add the following snippet to your workflow script to include this module.
include { NANOLYSE } from 'nf-core/nanolyse'
License
MIT License
Process
Name
|
NANOLYSE |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastq
file
|
Basecalled reads in FASTQ.GZ format *.fastq.gz
|
fasta
file
|
A reference fasta file against which to filter. *.fasta
|
|---|
Output
3 channels
#1
log
*.log
file
|
Log of the Nanolyse run. *.log
|
|---|
#2
fastq
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.fastq.gz
file
|
Reads with contaminants removed in FASTQ format *.fastq.gz
|
#3
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| nanolyse | DNA contaminant removal using NanoLyse | https://github.com/wdecoster/nanolyse |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:20:52 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fnanolyse/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/nanolyse/blobs/sha256:a4d1b32f6a4fff68c41e8ff9532e9a275a58550de0cc11f4977462734dae78c9 |
| Size | 2.4 KB |
| Checksum | sha256:a4d1b32f6a4fff68c41e8ff9532e9a275a58550de0cc11f4977462734dae78c9 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:32:51 (UTC) | 3 | 2.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:23:23 (UTC) | 3 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:20:52 (UTC) | 3 | 2.4 KB |