nf-core/odgi/build @ 0.0.0-3fc6d40
Summary
Construct a dynamic succinct variation graph in ODGI format from a GFAv1.
Get started
Add the following snippet to your workflow script to include this module.
include { ODGI_BUILD } from 'nf-core/odgi/build'
License
MIT License
Process
Name
|
ODGI_BUILD |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
graph
file
|
Pangenome graph in GFA v1.0 format *.{gfa}
|
Output
2 channels
#1
og
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.og
file
|
File containing a pangenome graph in ODGI binary format. Usually ends with '.og' *.{og}
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| odgi | An optimized dynamic genome/graph implementation | https://github.com/pangenome/odgi |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:23:49 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fodgi%2Fbuild/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/odgi/build/blobs/sha256:fad39e69222b9fc6d05395330ac58a98ef6f51da592c2bdba0bfbc91e8f8cce6 |
| Size | 2.2 KB |
| Checksum | sha256:fad39e69222b9fc6d05395330ac58a98ef6f51da592c2bdba0bfbc91e8f8cce6 |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:33:23 (UTC) | 5 | 2.1 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:23:49 (UTC) | 2 | 2.2 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:21:48 (UTC) | 3 | 2.1 KB |