nf-core/rattle/cluster @ 0.0.0-3fc6d40
Summary
Reference-free reconstruction and quantification of transcriptomes from long-read sequencing
Get started
Add the following snippet to your workflow script to include this module.
include { RATTLE_CLUSTER } from 'nf-core/rattle/cluster'
License
MIT License
Process
Name
|
RATTLE_CLUSTER |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
reads
file
|
Input file in FASTA/FASTQ format. *.{fasta,fastq,fasta.gz,fastq.gz,fa,fq,fa.gz,fq.gz}
|
Output
2 channels
#1
clusters
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
clusters.out
file
|
Output clusters in binary format. clusters.out
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| rattle | Reference-free reconstruction and quantification of transcriptomes from long-read sequencing | https://github.com/comprna/RATTLE |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:28:44 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Frattle%2Fcluster/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/rattle/cluster/blobs/sha256:353ea6af3298a325f3f2bc81eac4cf392c13a1457a8eecbbbcd52311d6843ce3 |
| Size | 2.1 KB |
| Checksum | sha256:353ea6af3298a325f3f2bc81eac4cf392c13a1457a8eecbbbcd52311d6843ce3 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:40:31 (UTC) | 3 | 2.1 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:28:44 (UTC) | 3 | 2.1 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:30:20 (UTC) | 3 | 2.1 KB |