nf-core/seqfu/stats @ 0.0.0-6c4ed3a
Summary
Statistics for FASTA or FASTQ files
Get started
Add the following snippet to your workflow script to include this module.
include { SEQFU_STATS } from 'nf-core/seqfu/stats'
License
MIT License
Process
Name
|
SEQFU_STATS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
files
file
|
One or more FASTA or FASTQ files *.{fasta,fastq,fasta.gz,fastq.gz,fq,fq.gz}
|
Output
3 channels
#1
stats
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.tsv
file
|
Tab-separated output file with basic sequence statistics. *.{tsv}
|
#2
multiqc
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*_mqc.txt
file
|
MultiQC ready table *.{_mqc.txt}
|
#3
versions_seqfu
tuple
${task.process}
string
|
The name of the process |
|---|---|
seqfu
string
|
The name of the tool |
seqfu version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| seqfu | Cross-platform compiled suite of tools to manipulate and inspect FASTA and FASTQ files | https://telatin.github.io/seqfu2/ |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:44:21 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fseqfu%2Fstats/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/seqfu/stats/blobs/sha256:07792ffbabaab1e8ffdc210c05fbfadb159a38db1e39e3f2a01cc16d82659f86 |
| Size | 2.5 KB |
| Checksum | sha256:07792ffbabaab1e8ffdc210c05fbfadb159a38db1e39e3f2a01cc16d82659f86 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:44:21 (UTC) | 3 | 2.5 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:30:16 (UTC) | 1 | 2.6 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:36:26 (UTC) | 3 | 2.5 KB |