nf-core/tailfindr @ 0.0.0-3fc6d40
Summary
Estimating poly(A)-tail lengths from basecalled fast5 files produced by Nanopore sequencing of RNA and DNA
Get started
Add the following snippet to your workflow script to include this module.
include { TAILFINDR } from 'nf-core/tailfindr'
License
MIT License
Process
Name
|
TAILFINDR |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test' ] |
|---|---|
fast5
file
|
fast5 file *.fast5
|
Output
3 channels
#1
csv_gz
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test' ] |
|---|---|
*.csv.gz
file
|
Compressed csv file *.csv.gz
|
#2
versions_tailfindr
tuple
${task.process}
string
|
The name of the process |
|---|---|
tailfindr
string
|
The name of the tool |
Rscript -e "cat(paste(packageVersion('tailfindr'), collapse='.'))"
eval
|
The expression to obtain the version of the tool |
#3
versions_ont_fast5_api
tuple
${task.process}
string
|
The name of the process |
|---|---|
ont-fast5-api
string
|
The name of the tool |
python -c "import ont_fast5_api; print(ont_fast5_api.__version__)"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| tailfindr | An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads. | https://github.com/adnaniazi/tailfindr |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | cd0ad387832473916b1f1c80c2ca673a7883bf94 |
| Release Date | 22 Apr 2026 15:34:09 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Ftailfindr/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/tailfindr/blobs/sha256:deb25a961268dfeb087adf9bd504ddc57a6228c45c1626f3234ba4dff2b4a8b4 |
| Size | 2.3 KB |
| Checksum | sha256:deb25a961268dfeb087adf9bd504ddc57a6228c45c1626f3234ba4dff2b4a8b4 |
| Downloads | 0 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-cd0ad38 | 19 May 2026 15:01:47 (UTC) | 0 | 2.4 KB | ↔ | |
| 0.0.0-6c4ed3a | 23 Apr 2026 15:49:17 (UTC) | 0 | 2.3 KB | ↔ | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:34:09 (UTC) | 0 | 2.3 KB | ↔ | |
| 0.0.0-0c7146d | 08 Apr 2026 19:42:54 (UTC) | 0 | 2.3 KB | - |