Nextflow Modules
Showing module(s) with keyword "bamUtil"
| Module | Keywords | Description |
|---|---|---|
| nf-core/bamutil/clipoverlap | bam clipping clipOverlap bamUtil | clips overlapping read pairs. When two mates overlap, this tool will clip the record's whose clipped region would have the lowest average quality. |
| nf-core/bamutil/trimbam | bam trim clipping bamUtil trimBam | trims the end of reads in a SAM/BAM file, changing read ends to ‘N’ and quality to ‘!’, or by soft clipping |