Nextflow Modules
Showing module(s) with keyword "beagle5"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/vcf_impute_beagle5 | Workflow | VCF imputation beagle5 phasing | Subworkflow to impute VCF files using BEAGLE5 software. The subworkflow takes VCF files, phased reference panel, genetic maps and chunks region to perform imputation and outputs phased and imputed VCF files. Meta map of all channels, except ch_input, will be used to perform joint operations. "regionout", "regionoutPadded", "regionSize" keys will be added to the meta map to distinguish the different files before ligation and therefore should not be used. |