Nextflow Modules
Showing module(s) with keyword "bgen"
| Module | Keywords | Description |
|---|---|---|
| nf-core/stitch | imputation genomics vcf bgen cram bam sam | STITCH is an R program for reference panel free, read aware, low coverage sequencing genotype imputation. STITCH runs on a set of samples with sequencing reads in BAM format, as well as a list of positions to genotype, and outputs imputed genotypes in VCF format. |