Nextflow Modules
Showing module(s) with keyword "calls"
| Module | Keywords | Description |
|---|---|---|
| nf-core/modkit/extractcalls | modkit methylation extract calls read-level modbam nanopore ont | Produce a per-read per-position table of base modification **calls** (pass/fail/filtered, with the called base) from a modBAM using the same thresholding algorithm as `modkit pileup`. Complementary to `modkit extract full`, which emits raw probabilities: `extract calls` emits the thresholded categorical decision per site per read. |