Nextflow Modules
Showing module(s) with keyword "fiberseq"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/fibertoolsrs/addnucleosomes | Process | methylation genomics bam m6A nucleosome fiberseq | Add nucleosomes positions and MSP position to ONT BAM files |
| nf-core/fibertoolsrs/extract | Process | methylation genomics bam m6A fiberseq | Extract Fiber-seq information (such as m6A, CpG, nucleosomes, and MSPs) from BAM file into BED file |
| nf-core/fibertoolsrs/predictm6a | Process | methylation genomics bam m6A nucleosome fiberseq | Predict m6A positions using HiFi kinetics data and encode the results in the MM and ML bam tags. Also adds nucleosome (nl, ns) and MTase sensitive patches (al, as) |