Nextflow Modules
Showing module(s) with keyword "genome assembly"
| Module | Keywords | Description |
|---|---|---|
| nf-core/gfastats | gfastats fasta genome assembly genome summary genome manipulation genome statistics | A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation. |
| nf-core/hifiasm | genome assembly haplotype resolution phasing PacBio HiFi long reads | Whole-genome assembly using PacBio HiFi reads |
| nf-core/kmergenie | k-mer count genome assembly | KmerGenie estimates the best k-mer length for genome de novo assembly |
| nf-core/purgedups/pbcstat | sort genome assembly purge duplications read depth | Create read depth histogram and base-level read depth for an assembly based on pacbio data |