Nextflow Modules
Showing module(s) with keyword "getpileupsummaries"
| Module | Keywords | Description |
|---|---|---|
| nf-core/gatk4/calculatecontamination | gatk4 calculatecontamination cross-samplecontamination getpileupsummaries filtermutectcalls | Calculates the fraction of reads from cross-sample contamination based on summary tables from getpileupsummaries. Output to be used with filtermutectcalls. |