Nextflow Modules
Showing module(s) with keyword "interval"
| Module | Keywords | Description |
|---|---|---|
| nf-core/gatk4/intervallisttobed | bed conversion gatk4 interval | Converts an Picard IntervalList file to a BED file. |
| nf-core/gatk4/preprocessintervals | bed gatk4 interval preprocessintervals | Prepares bins for coverage collection. |
| nf-core/gatk4/splitintervals | bed gatk4 interval splitintervals | Split intervals into sub-interval files. |
| nf-core/windowmasker/mkcounts | fasta interval windowmasker | A program to generate frequency counts of repetitive units. |
| nf-core/windowmasker/ustat | fasta interval windowmasker | A program to take a counts file and creates a file of genomic co-ordinates to be masked. |