Nextflow Modules
Showing module(s) with keyword "msisensor-pro"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/msisensorpro/baseline | Process | msisensor-pro baseline micro-satellite tumor-only panel-of-normals | MSIsensor-pro/baseline builds a baseline microsatellite file from a panel of normal samples, for use with msisensor-pro/pro tumor-only MSI detection. |
| nf-core/msisensorpro/msisomatic | Process | micro-satellite-scan msisensor-pro msi somatic | MSIsensor-pro evaluates Microsatellite Instability (MSI) for cancer patients with next generation sequencing data. It accepts the whole genome sequencing, whole exome sequencing and target region (panel) sequencing data as input |
| nf-core/msisensorpro/pro | Process | msisensor-pro pro micro-satellite | MSIsensor-pro/pro is a tool used to evaluate MSI using single (tumor) sample sequencing data |
| nf-core/msisensorpro/scan | Process | micro-satellite-scan msisensor-pro scan | MSIsensor-pro evaluates Microsatellite Instability (MSI) for cancer patients with next generation sequencing data. It accepts the whole genome sequencing, whole exome sequencing and target region (panel) sequencing data as input |