Nextflow Modules
Showing module(s) with keyword "phenotyper"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/pharmcat/phenotyper | Process | vcf pharmcat phenotyper PGx | The PharmCAT Phenotyper is a core module of the Pharmacogenomics Clinical Annotation Tool that translates patient diplotypes into specific, actionable metabolizer phenotypes (e.g., Poor Metabolizer). It operates by analyzing the JSON output from the Named Allele Matcher, mapping these results to established clinical guidelines (such as CPIC) to predict drug response. |