Nextflow Modules
Showing module(s) with keyword "quilt"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/bam_impute_quilt | Workflow | BAM imputation quilt | Subworkflow to impute BAM files using QUILT software. Variants location to impute are obtain through the tsv file given. "regionout", "regionoutPadded", "regionSize" keys will be added to the meta map to distinguish the different files before ligation and therefore should not be used. |
| nf-core/bam_impute_quilt2 | Workflow | bam cram imputation quilt quilt2 vcf | Impute low-coverage BAM or CRAM inputs with QUILT2 and ligate chunked outputs per chromosome. "regionout", "regionoutPadded", "regionSize" keys will be added to the meta map to distinguish the different files before ligation and therefore should not be used. |