Nextflow Modules
Showing module(s) with keyword "single"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/controlfreec/assesssignificance | Process | cna cnv somatic single tumor-only | Add both Wilcoxon test and Kolmogorov-Smirnov test p-values to each CNV output of FREEC |
| nf-core/controlfreec/freec | Process | cna cnv somatic single tumor-only | Copy number and genotype annotation from whole genome and whole exome sequencing data |
| nf-core/controlfreec/freec2bed | Process | cna cnv somatic single tumor-only | Plot Freec output |
| nf-core/controlfreec/freec2circos | Process | cna cnv somatic single tumor-only | Format Freec output to circos input format |
| nf-core/controlfreec/makegraph | Process | cna cnv somatic single tumor-only | Plot Freec output |
| nf-core/controlfreec/makegraph2 | Process | cna cnv somatic single tumor-only | Plot Freec output |