Nextflow Modules
Showing module(s) with keyword "spatial_omics"
| Module | Keywords | Description |
|---|---|---|
| nf-core/deepcell/mesmer | imaging spatial_omics segmentation | Deepcell/mesmer segmentation for whole-cell |
| nf-core/scimap/spatiallda | spatial_neighborhoods scimap spatial_omics | SpatialLDA uses an LDA based approach for the identification of cellular neighborhoods, using cell type identities. |