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Nextflow Pipelines

Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.

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2 pipeline(s) matching "viruses".

Pipeline Keywords Description
nf-core/metatdenovo
2.0.0
eukaryotes metagenomics metatranscriptomics prokaryotes +1 Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
nf-core/vipr
0.0.0-6eef3b3
genome-assembly metagenomics variant-calling viral +5 Assembly and intrahost / low-frequency variant calling for viral samples