nf-core/biscuit/index @ 0.0.0-0c7146d
Summary
Indexes a reference genome for use with Biscuit
Get started
Add the following snippet to your workflow script to include this module.
include { BISCUIT_INDEX } from 'nf-core/biscuit/index'
License
MIT License
Process
Name
|
BISCUIT_INDEX |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fasta
file
|
Input genome fasta file |
Output
2 channels
#1
index
tuple
meta
directory
|
Directory containing biscuit genome index index
|
|---|---|
BiscuitIndex
directory
|
Directory containing biscuit genome index index
|
#2
versions_biscuit
tuple
${task.process}
string
|
The name of the process |
|---|---|
biscuit
string
|
The name of the tool |
biscuit version |& sed '1!d; s/^.*BISCUIT Version: //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| biscuit | A utility for analyzing sodium bisulfite conversion-based DNA methylation/modification data | https://huishenlab.github.io/biscuit/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 18:47:54 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fbiscuit%2Findex/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/biscuit/index/blobs/sha256:753ac8f0a229289290852bb4fdea8728e97b9c402f451b58d705b1a199470ff8 |
| Size | 2.5 KB |
| Checksum | sha256:753ac8f0a229289290852bb4fdea8728e97b9c402f451b58d705b1a199470ff8 |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:06:22 (UTC) | 4 | 2.5 KB | |
| 0.0.0-7f68141 | 16 Apr 2026 15:00:12 (UTC) | 3 | 2.5 KB | |
| 0.0.0-20423f5 | 14 Apr 2026 15:00:06 (UTC) | 4 | 2.5 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:47:54 (UTC) | 4 | 2.5 KB |