nf-core/cooler/merge @ 0.0.0-6c4ed3a
Summary
Merge multiple coolers with identical axes
Get started
Add the following snippet to your workflow script to include this module.
include { COOLER_MERGE } from 'nf-core/cooler/merge'
License
MIT License
Process
Name
|
COOLER_MERGE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
cool
file
|
Path to COOL file *.{cool,mcool}
|
Output
2 channels
#1
cool
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.cool
file
|
Path to COOL file *.cool
|
#2
versions_cooler
tuple
${task.process}
string
|
The name of the process |
|---|---|
cooler
string
|
The name of the tool |
cooler --version 2>&1 | sed "s/cooler, version //"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| cooler | Sparse binary format for genomic interaction matrices | https://open2c.github.io/cooler/ |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:11:25 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fcooler%2Fmerge/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/cooler/merge/blobs/sha256:4ca6887e470585d98be61e01585066c0ed2cf2542e216a58599100260fa310c5 |
| Size | 2.2 KB |
| Checksum | sha256:4ca6887e470585d98be61e01585066c0ed2cf2542e216a58599100260fa310c5 |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:11:25 (UTC) | 2 | 2.2 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:07:55 (UTC) | 3 | 2.2 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:54:10 (UTC) | 2 | 2.2 KB |