nf-core/cooler/zoomify @ 0.0.0-3fc6d40
Summary
Generate a multi-resolution cooler file by coarsening
Get started
Add the following snippet to your workflow script to include this module.
include { COOLER_ZOOMIFY } from 'nf-core/cooler/zoomify'
License
MIT License
Process
Name
|
COOLER_ZOOMIFY |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
cool
file
|
Path to COOL file *.{cool,mcool}
|
Output
2 channels
#1
mcool
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.mcool
file
|
Output mcool file *.mcool
|
#2
versions_cooler
tuple
${task.process}
string
|
The name of the process |
|---|---|
cooler
string
|
The name of the tool |
cooler --version 2>&1 | sed "s/cooler, version //"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| cooler | Sparse binary format for genomic interaction matrices | https://open2c.github.io/cooler/ |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:07:56 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fcooler%2Fzoomify/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/cooler/zoomify/blobs/sha256:088abb85655936992e70069beb88742a126c39bbc99682735fe1b623b4b02290 |
| Size | 2.3 KB |
| Checksum | sha256:088abb85655936992e70069beb88742a126c39bbc99682735fe1b623b4b02290 |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:11:27 (UTC) | 3 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:07:56 (UTC) | 2 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:54:12 (UTC) | 3 | 2.3 KB |