Nextflow Registry | nf-core/find/unpigz@0.0.0-0c7146d

nf-core/find/unpigz @ 0.0.0-0c7146d

A module for decompressing a large number of gzipped files, getting around the UNIX terminal argument limit

gzip find pigz

Latest version: 0.0.0-6c4ed3a

Total downloads: 6

Source: nf-core/modules

Authors: @Biowilko

Maintainers: @Biowilko

A module for decompressing a large number of gzipped files, getting around the UNIX terminal argument limit

Add the following snippet to your workflow script to include this module.

include { FIND_UNPIGZ } from 'nf-core/find/unpigz'

MIT License

Process

`Name`	`FIND_UNPIGZ`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
`files_in` file	List of gzipped files to decompress `*.gz`

Output 2 channels

#1 file_out tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1', single_end:false ]` `*`
`ungzipped/*` file	Files that have been decompressed `*`

#2 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
find	GNU find searches the directory tree rooted at each given starting-point by evaluating the given expression	n/a
pigz	pigz, which stands for Parallel Implementation of GZip, is a fully functional replacement for gzip that exploits multiple processors and multiple cores to the hilt when compressing data.	n/a

Version	0.0.0-0c7146d
Commit ID	6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date	08 Apr 2026 19:01:17 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Ffind%2Funpigz/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/find/unpigz/blobs/sha256:f13c6ec4e7dd5d29f4542a111d664779c4460b95d248a0838e00acd147dd84dc
Size	3.0 KB
Checksum	sha256:f13c6ec4e7dd5d29f4542a111d664779c4460b95d248a0838e00acd147dd84dc
Downloads	2

Version	Date	Status	Downloads	Size
0.0.0-6c4ed3a	23 Apr 2026 15:17:28 (UTC)		4	3.0 KB
0.0.0-0c7146d	08 Apr 2026 19:01:17 (UTC)		2	3.0 KB