Nextflow Modules
Showing module(s) with keyword "gzip"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/archive_extract | Workflow | archive gzip tar zip | Extract archive(s) from any format Currently supported format are .gz, .tar.gz, .zip |
| nf-core/cat/cat | Process | concatenate gzip cat | A module for concatenation of gzipped or uncompressed files |
| nf-core/crabz/compress | Process | compression gzip zlib | Compress files with crabz |
| nf-core/crabz/decompress | Process | decompression gzip zlib | Decompress files with crabz |
| nf-core/find/concatenate | Process | concatenate gzip cat find pigz | A module for concatenation of gzipped or uncompressed files getting around UNIX terminal argument size |
| nf-core/find/unpigz | Process | gzip find pigz | A module for decompressing a large number of gzipped files, getting around the UNIX terminal argument limit |
| nf-core/htslib/bgziptabix | Process | compress decompress index bgzip tabix gzip bzip xz | Multi-purpose module to compress, decompress and index files using bgzip and tabix. |
| nf-core/pigz/compress | Process | compress gzip parallelized | Compresses files with pigz. |
| nf-core/pigz/uncompress | Process | uncompress gzip parallelized | write your description here |
| nf-core/samtools/bgzip | Process | compression fasta gff vcf bed BGZF gzip bgzip | DEPRECATED. Use HTSLIB/BGZIPTABIX instead. Converts an arbitrary compressed or uncompressed file to BGZIP |
| nf-core/tar | Process | untar tar tarball compression archive gzip targz | Compress directories into tarballs with various compression options |