nf-core/gcta/addgrms @ 0.0.0-76dfaba
Summary
Combine multiple GRMs listed in an MGRM manifest into a single dense GRM
Get started
Add the following snippet to your workflow script to include this module.
include { GCTA_ADDGRMS } from 'nf-core/gcta/addgrms'
License
MIT License
Process
Name
|
GCTA_ADDGRMS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy map containing combined GRM metadata e.g. |
|---|---|
mgrm_file
file
|
MGRM manifest listing the GRM prefixes to combine *.mgrm
|
grm_files
file
|
GRM sidecar files referenced by *
|
Output
2 channels
#1
combined_grm
tuple
meta
map
|
Groovy map containing combined GRM metadata e.g. |
|---|---|
*.grm.*
file
|
Combined dense GRM sidecar files *.grm.{id,bin,N.bin}
|
#2
versions_gcta
tuple
${task.process}
string
|
The process the version was collected from |
|---|---|
gcta
string
|
The tool name |
gcta --version | sed -En 's/^[*] version v([0-9.]*).*/\1/p'
eval
|
The command used to retrieve the GCTA version |
| Tool | Description | Homepage |
|---|---|---|
| gcta | Genome-wide Complex Trait Analysis (GCTA) estimates genetic relationships, variance components, and association statistics from genome-wide data. | https://yanglab.westlake.edu.cn/software/gcta/ |
| Version | 0.0.0-76dfaba |
|---|---|
| Commit ID | 76dfaba27ac4eacd80cdac5ba28985ee2646b0bd |
| Release Date | 27 May 2026 15:00:39 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fgcta%2Faddgrms/0.0.0-76dfaba/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/gcta/addgrms/blobs/sha256:4f9a8d97fe76cc744487425bf3b65c97e6676b692a77f99c8ababdf6e35383de |
| Size | 3.1 KB |
| Checksum | sha256:4f9a8d97fe76cc744487425bf3b65c97e6676b692a77f99c8ababdf6e35383de |
| Downloads | 0 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-76dfaba | 27 May 2026 15:00:39 (UTC) | 0 | 3.1 KB | - |