nf-core/gunc/downloaddb @ 0.0.0-6c4ed3a
Summary
Download database for GUNC detection of Chimerism and Contamination in Prokaryotic Genomes
Get started
Add the following snippet to your workflow script to include this module.
include { GUNC_DOWNLOADDB } from 'nf-core/gunc/downloaddb'
License
MIT License
Process
Name
|
GUNC_DOWNLOADDB |
|---|
Input
1 channel
db_name
string
|
Which database to download. Options: progenomes or gtdb progenomes|gtdb
|
|---|
Output
2 channels
#1
db
*.dmnd
file
|
GUNC database file *.dmnd
|
|---|
#2
versions_gunc
tuple
${task.process}
string
|
The name of the process |
|---|---|
gunc
string
|
The name of the tool |
gunc --version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| gunc | Python package for detection of chimerism and contamination in prokaryotic genomes. | https://grp-bork.embl-community.io/gunc/ |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:23:12 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fgunc%2Fdownloaddb/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/gunc/downloaddb/blobs/sha256:b8c7ab143bfd3a011ce0f5174e15775654b4048ec730f4c72b380511cfdd3157 |
| Size | 2.1 KB |
| Checksum | sha256:b8c7ab143bfd3a011ce0f5174e15775654b4048ec730f4c72b380511cfdd3157 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:23:12 (UTC) | 3 | 2.1 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:08:11 (UTC) | 3 | 2.1 KB |