nf-core/hmtnote/annotate @ 0.0.0-3fc6d40
Summary
Human mitochondrial variants annotation using HmtVar. Contains .plk file with annotation, so can be run offline
Get started
Add the following snippet to your workflow script to include this module.
include { HMTNOTE_ANNOTATE } from 'nf-core/hmtnote/annotate'
License
MIT License
Process
Name
|
HMTNOTE_ANNOTATE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information |
|---|---|
vcf
file
|
vcf file *.vcf
|
Output
2 channels
#1
vcf
tuple
meta
map
|
Groovy Map containing sample information |
|---|---|
*_annotated.vcf
file
|
annotated vcf *_annotated.vcf
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| hmtnote | Human mitochondrial variants annotation using HmtVar. | https://github.com/robertopreste/HmtNote |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:16:37 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fhmtnote%2Fannotate/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/hmtnote/annotate/blobs/sha256:8d25264dc4a8b5edbec5b8f404559aec3050f66b5d05db518fa420b9d100309c |
| Size | 2.3 KB |
| Checksum | sha256:8d25264dc4a8b5edbec5b8f404559aec3050f66b5d05db518fa420b9d100309c |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:24:29 (UTC) | 1 | 2.2 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:16:37 (UTC) | 3 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:09:52 (UTC) | 3 | 2.2 KB |